STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_24715Unannotated protein. (344 aa)    
Predicted Functional Partners:
GCA_000718095_05854
Unannotated protein.
  
 
  0.829
Y717_25610
Unannotated protein.
  
 
  0.821
Y717_24930
Unannotated protein.
  
 
  0.811
xylA
Unannotated protein; Belongs to the xylose isomerase family.
     
 0.803
Y717_24720
Unannotated protein; Belongs to the mannitol dehydrogenase family.
 
  
 0.781
kbl
Unannotated protein; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.766
Y717_20055
Unannotated protein.
    
 0.721
Y717_24730
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.683
Y717_26270
Unannotated protein.
   
 
  0.652
Y717_00480
Unannotated protein.
 
 
0.638
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.