STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_29805Unannotated protein. (1224 aa)    
Predicted Functional Partners:
Y717_30820
Unannotated protein.
 
     0.937
Y717_29810
Unannotated protein.
       0.873
Y717_30825
Unannotated protein.
       0.754
Y717_00745
Unannotated protein.
  
     0.720
Y717_06755
Unannotated protein.
  
  
 0.714
Y717_29800
Unannotated protein.
       0.676
Y717_29795
Unannotated protein.
       0.664
Y717_23080
Unannotated protein.
  
     0.635
Y717_28940
Unannotated protein.
  
     0.634
GCA_000718095_05289
Unannotated protein.
 
     0.619
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.