STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_25970Unannotated protein. (257 aa)    
Predicted Functional Partners:
Y717_25955
Unannotated protein.
 
   
 0.885
Y717_25965
Unannotated protein.
 
    
0.835
Y717_25960
Unannotated protein.
       0.813
Y717_25950
Unannotated protein.
       0.720
crgA
Unannotated protein; Involved in cell division; Belongs to the CrgA family.
       0.674
Y717_23695
Unannotated protein.
  
     0.559
Y717_29725
Unannotated protein.
  
     0.533
Y717_01145
Unannotated protein.
  
     0.469
Y717_27945
Unannotated protein.
  
     0.463
Y717_34595
Unannotated protein.
      
 0.424
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.