STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_07190Unannotated protein. (277 aa)    
Predicted Functional Partners:
Y717_07185
Unannotated protein.
 
     0.841
Y717_07230
Unannotated protein.
 
     0.784
Y717_07325
Unannotated protein.
  
     0.773
Y717_31880
Unannotated protein.
  
     0.773
Y717_18620
Unannotated protein.
  
     0.767
Y717_15260
Unannotated protein.
  
     0.766
Y717_28615
Unannotated protein.
  
     0.766
Y717_14500
Unannotated protein.
  
     0.765
Y717_07320
Unannotated protein.
  
     0.765
Y717_07795
Unannotated protein.
  
     0.763
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.