Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL65074.1 | SDL65104.1 | SAMN04488568_101200 | SAMN04488568_101201 | Type II secretion system protein C (GspC). | Type II secretion system protein D (GspD). | 0.995 |
SDL65074.1 | SDL65127.1 | SAMN04488568_101200 | SAMN04488568_101202 | Type II secretion system protein C (GspC). | General secretion pathway protein E. | 0.810 |
SDL65074.1 | SDL65198.1 | SAMN04488568_101200 | SAMN04488568_101203 | Type II secretion system protein C (GspC). | Type II secretion system protein F (GspF). | 0.868 |
SDL65074.1 | SDL65256.1 | SAMN04488568_101200 | SAMN04488568_101204 | Type II secretion system protein C (GspC). | Type II secretion system protein G (GspG). | 0.878 |
SDL65074.1 | SDL65314.1 | SAMN04488568_101200 | SAMN04488568_101205 | Type II secretion system protein C (GspC). | Type II secretion system protein H (GspH). | 0.906 |
SDL65074.1 | SDL65333.1 | SAMN04488568_101200 | SAMN04488568_101206 | Type II secretion system protein C (GspC). | Type II secretion system protein I (GspI). | 0.959 |
SDL65074.1 | SDL65359.1 | SAMN04488568_101200 | SAMN04488568_101207 | Type II secretion system protein C (GspC). | Type II secretion system protein J (GspJ). | 0.961 |
SDL65074.1 | SDL65385.1 | SAMN04488568_101200 | SAMN04488568_101208 | Type II secretion system protein C (GspC). | Type II secretion system protein K (GspK). | 0.952 |
SDL65074.1 | SDL65412.1 | SAMN04488568_101200 | SAMN04488568_101209 | Type II secretion system protein C (GspC). | General secretion pathway protein L. | 0.921 |
SDL65074.1 | SDL67787.1 | SAMN04488568_101200 | SAMN04488568_101281 | Type II secretion system protein C (GspC). | Type II secretion system protein D (GspD). | 0.943 |
SDL65104.1 | SDL65074.1 | SAMN04488568_101201 | SAMN04488568_101200 | Type II secretion system protein D (GspD). | Type II secretion system protein C (GspC). | 0.995 |
SDL65104.1 | SDL65127.1 | SAMN04488568_101201 | SAMN04488568_101202 | Type II secretion system protein D (GspD). | General secretion pathway protein E. | 0.949 |
SDL65104.1 | SDL65198.1 | SAMN04488568_101201 | SAMN04488568_101203 | Type II secretion system protein D (GspD). | Type II secretion system protein F (GspF). | 0.963 |
SDL65104.1 | SDL65256.1 | SAMN04488568_101201 | SAMN04488568_101204 | Type II secretion system protein D (GspD). | Type II secretion system protein G (GspG). | 0.971 |
SDL65104.1 | SDL65314.1 | SAMN04488568_101201 | SAMN04488568_101205 | Type II secretion system protein D (GspD). | Type II secretion system protein H (GspH). | 0.917 |
SDL65104.1 | SDL65333.1 | SAMN04488568_101201 | SAMN04488568_101206 | Type II secretion system protein D (GspD). | Type II secretion system protein I (GspI). | 0.863 |
SDL65104.1 | SDL65359.1 | SAMN04488568_101201 | SAMN04488568_101207 | Type II secretion system protein D (GspD). | Type II secretion system protein J (GspJ). | 0.962 |
SDL65104.1 | SDL65385.1 | SAMN04488568_101201 | SAMN04488568_101208 | Type II secretion system protein D (GspD). | Type II secretion system protein K (GspK). | 0.959 |
SDL65104.1 | SDL65412.1 | SAMN04488568_101201 | SAMN04488568_101209 | Type II secretion system protein D (GspD). | General secretion pathway protein L. | 0.875 |
SDL65104.1 | SDL67787.1 | SAMN04488568_101201 | SAMN04488568_101281 | Type II secretion system protein D (GspD). | Type II secretion system protein D (GspD). | 0.854 |
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