STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL65772.1Signal transduction histidine kinase. (593 aa)    
Predicted Functional Partners:
SDM88791.1
PAS domain S-box-containing protein.
 
0.998
SDM22815.1
PAS domain S-box-containing protein.
 
0.997
SDM87005.1
Hypothetical protein.
  
 0.996
SDM80668.1
PAS domain S-box-containing protein.
 
 
0.994
SDL76500.1
PAS domain S-box-containing protein.
 
 
0.993
SDM49027.1
PAS domain S-box-containing protein.
 
0.993
SDM74786.1
Signal transduction histidine kinase.
 
0.993
SDM90121.1
PAS domain S-box-containing protein.
 
0.981
SDL97497.1
Signal transduction histidine kinase.
 
0.980
SDM04501.1
Two-component system, cell cycle sensor histidine kinase PleC.
 
0.980
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.