STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL69612.1Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. (292 aa)    
Predicted Functional Partners:
SDM88791.1
PAS domain S-box-containing protein.
    
 0.931
SDM22815.1
PAS domain S-box-containing protein.
   
 0.917
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.897
SDM06671.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
0.835
SDM87005.1
Hypothetical protein.
 
 
 0.811
SDL68431.1
Uncharacterized sulfatase.
 
   0.774
SDL68315.1
Arylsulfatase A.
 
   0.768
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.746
SDL68235.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
 0.734
SDL66936.1
Serine/threonine protein phosphatase 1.
    
 0.716
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.