STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL75974.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
SDL76001.1
Uncharacterized conserved protein.
       0.834
SDM85920.1
dCTP deaminase.
  
  
  0.800
SDL76045.1
Ribosomal large subunit pseudouridine synthase A.
  
   0.795
SDM62514.1
NifU homolog involved in Fe-S cluster formation.
  
     0.741
SDM16988.1
Protein of unknown function.
  
     0.726
SDM74551.1
Protein of unknown function.
  
     0.689
SDM30072.1
HAD-superfamily class IIA hydrolase, TIGR01459.
 
  
 0.651
hisS
histidyl-tRNA synthetase.
  
     0.640
SDM16603.1
Protein of unknown function.
  
     0.594
SDM39935.1
HemY protein.
  
     0.587
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.