Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM22871.1 | SDM22931.1 | SAMN04488568_10732 | SAMN04488568_10734 | Protein of unknown function (DU1801). | Hypothetical protein. | 0.540 |
SDM22871.1 | SDM22992.1 | SAMN04488568_10732 | SAMN04488568_10736 | Protein of unknown function (DU1801). | Hypothetical protein. | 0.405 |
SDM22871.1 | argS | SAMN04488568_10732 | SAMN04488568_10735 | Protein of unknown function (DU1801). | arginyl-tRNA synthetase. | 0.540 |
SDM22871.1 | ispH | SAMN04488568_10732 | SAMN04488568_10733 | Protein of unknown function (DU1801). | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.810 |
SDM22871.1 | rnhA | SAMN04488568_10732 | SAMN04488568_10731 | Protein of unknown function (DU1801). | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.810 |
SDM22931.1 | SDM22871.1 | SAMN04488568_10734 | SAMN04488568_10732 | Hypothetical protein. | Protein of unknown function (DU1801). | 0.540 |
SDM22931.1 | SDM22992.1 | SAMN04488568_10734 | SAMN04488568_10736 | Hypothetical protein. | Hypothetical protein. | 0.565 |
SDM22931.1 | argS | SAMN04488568_10734 | SAMN04488568_10735 | Hypothetical protein. | arginyl-tRNA synthetase. | 0.878 |
SDM22931.1 | ispH | SAMN04488568_10734 | SAMN04488568_10733 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.613 |
SDM22931.1 | rnhA | SAMN04488568_10734 | SAMN04488568_10731 | Hypothetical protein. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.572 |
SDM22992.1 | SDM22871.1 | SAMN04488568_10736 | SAMN04488568_10732 | Hypothetical protein. | Protein of unknown function (DU1801). | 0.405 |
SDM22992.1 | SDM22931.1 | SAMN04488568_10736 | SAMN04488568_10734 | Hypothetical protein. | Hypothetical protein. | 0.565 |
SDM22992.1 | argS | SAMN04488568_10736 | SAMN04488568_10735 | Hypothetical protein. | arginyl-tRNA synthetase. | 0.565 |
SDM22992.1 | ispH | SAMN04488568_10736 | SAMN04488568_10733 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.405 |
SDM22992.1 | rnhA | SAMN04488568_10736 | SAMN04488568_10731 | Hypothetical protein. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.405 |
argS | SDM22871.1 | SAMN04488568_10735 | SAMN04488568_10732 | arginyl-tRNA synthetase. | Protein of unknown function (DU1801). | 0.540 |
argS | SDM22931.1 | SAMN04488568_10735 | SAMN04488568_10734 | arginyl-tRNA synthetase. | Hypothetical protein. | 0.878 |
argS | SDM22992.1 | SAMN04488568_10735 | SAMN04488568_10736 | arginyl-tRNA synthetase. | Hypothetical protein. | 0.565 |
argS | ispH | SAMN04488568_10735 | SAMN04488568_10733 | arginyl-tRNA synthetase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.612 |
argS | rnhA | SAMN04488568_10735 | SAMN04488568_10731 | arginyl-tRNA synthetase. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.572 |
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