STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM22118.1Enoyl-CoA hydratase/carnithine racemase. (256 aa)    
Predicted Functional Partners:
SDM22815.1
PAS domain S-box-containing protein.
    
 0.946
SDL97497.1
Signal transduction histidine kinase.
    
  0.894
SDM19935.1
Signal transduction histidine kinase.
    
  0.894
SDM34541.1
Signal transduction histidine kinase.
    
  0.894
SDM72197.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
    
  0.894
SDM74786.1
Signal transduction histidine kinase.
    
  0.894
SDL93713.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
0.812
SDM82810.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
  
 
0.793
rpsI
Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.750
rpsP
SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.748
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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