Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM03266.1 | SDM28143.1 | SAMN04488568_10465 | SAMN04488568_10837 | Protein of unknown function. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.724 |
SDM03266.1 | SDM60156.1 | SAMN04488568_10465 | SAMN04488568_11553 | Protein of unknown function. | Sulfur carrier protein. | 0.715 |
SDM03266.1 | SDM65750.1 | SAMN04488568_10465 | SAMN04488568_11739 | Protein of unknown function. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.595 |
SDM03266.1 | thiC | SAMN04488568_10465 | SAMN04488568_10855 | Protein of unknown function. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.756 |
SDM03266.1 | thiG | SAMN04488568_10465 | SAMN04488568_11552 | Protein of unknown function. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.807 |
SDM16467.1 | SDM28143.1 | SAMN04488568_1065 | SAMN04488568_10837 | Hypothetical protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.637 |
SDM17746.1 | SDM28143.1 | SAMN04488568_10652 | SAMN04488568_10837 | Thiamine-phosphate pyrophosphorylase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.965 |
SDM17746.1 | SDM60156.1 | SAMN04488568_10652 | SAMN04488568_11553 | Thiamine-phosphate pyrophosphorylase. | Sulfur carrier protein. | 0.772 |
SDM17746.1 | SDM65750.1 | SAMN04488568_10652 | SAMN04488568_11739 | Thiamine-phosphate pyrophosphorylase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.609 |
SDM17746.1 | thiC | SAMN04488568_10652 | SAMN04488568_10855 | Thiamine-phosphate pyrophosphorylase. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.824 |
SDM17746.1 | thiE | SAMN04488568_10652 | SAMN04488568_1051 | Thiamine-phosphate pyrophosphorylase. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.935 |
SDM17746.1 | thiG | SAMN04488568_10652 | SAMN04488568_11552 | Thiamine-phosphate pyrophosphorylase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.879 |
SDM17746.1 | thiL | SAMN04488568_10652 | SAMN04488568_103163 | Thiamine-phosphate pyrophosphorylase. | Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.855 |
SDM28111.1 | SDM28143.1 | SAMN04488568_10836 | SAMN04488568_10837 | Tetratricopeptide repeat-containing protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.689 |
SDM28143.1 | SDM03266.1 | SAMN04488568_10837 | SAMN04488568_10465 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Protein of unknown function. | 0.724 |
SDM28143.1 | SDM16467.1 | SAMN04488568_10837 | SAMN04488568_1065 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hypothetical protein. | 0.637 |
SDM28143.1 | SDM17746.1 | SAMN04488568_10837 | SAMN04488568_10652 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase. | 0.965 |
SDM28143.1 | SDM28111.1 | SAMN04488568_10837 | SAMN04488568_10836 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Tetratricopeptide repeat-containing protein. | 0.689 |
SDM28143.1 | SDM60156.1 | SAMN04488568_10837 | SAMN04488568_11553 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Sulfur carrier protein. | 0.894 |
SDM28143.1 | SDM65750.1 | SAMN04488568_10837 | SAMN04488568_11739 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.790 |
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