STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM48676.1glutaryl-CoA dehydrogenase. (403 aa)    
Predicted Functional Partners:
SDM27977.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.931
SDM65426.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.896
SDL64400.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.885
SDL63845.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.880
SDM48709.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.859
SDM63267.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.848
SDM63294.1
Electron transfer flavoprotein beta subunit.
  
 
 0.842
SDL96173.1
3-hydroxyisobutyryl-CoA hydrolase.
   
  0.766
SDL93713.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.738
SDL68179.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.733
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.