STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM55373.1Uncharacterized conserved protein, DUF983 family. (112 aa)    
Predicted Functional Partners:
SDM55401.1
Sulfate permease, SulP family.
       0.775
SDM55253.1
Arsenate reductase.
       0.625
SDM55280.1
Arsenite transporter, ACR3 family.
       0.625
SDM55314.1
Hypothetical protein.
       0.625
SDM55341.1
DNA-binding transcriptional regulator, ArsR family.
       0.625
SDM55428.1
Helix-turn-helix.
       0.589
SDM59826.1
NUDIX domain-containing protein.
 
     0.491
SDM52961.1
Hypothetical protein.
  
     0.434
SDM16988.1
Protein of unknown function.
  
     0.430
SDM74551.1
Protein of unknown function.
  
     0.429
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.