Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL76811.1 | SDM11986.1 | SAMN04488568_10282 | SAMN04488568_10580 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | Transcriptional regulator, contains XRE-family HTH domain. | 0.441 |
SDL76811.1 | SDM62895.1 | SAMN04488568_10282 | SAMN04488568_11645 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | Methyltransferase domain-containing protein. | 0.593 |
SDL97375.1 | SDM11986.1 | SAMN04488568_103213 | SAMN04488568_10580 | Uncharacterized conserved protein, LabA/DUF88 family. | Transcriptional regulator, contains XRE-family HTH domain. | 0.448 |
SDL97375.1 | SDM62895.1 | SAMN04488568_103213 | SAMN04488568_11645 | Uncharacterized conserved protein, LabA/DUF88 family. | Methyltransferase domain-containing protein. | 0.586 |
SDM02467.1 | SDM27184.1 | SAMN04488568_10438 | SAMN04488568_1085 | Phytoene synthase. | Cytochrome P450. | 0.838 |
SDM02467.1 | SDM62895.1 | SAMN04488568_10438 | SAMN04488568_11645 | Phytoene synthase. | Methyltransferase domain-containing protein. | 0.638 |
SDM11986.1 | SDL76811.1 | SAMN04488568_10580 | SAMN04488568_10282 | Transcriptional regulator, contains XRE-family HTH domain. | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | 0.441 |
SDM11986.1 | SDL97375.1 | SAMN04488568_10580 | SAMN04488568_103213 | Transcriptional regulator, contains XRE-family HTH domain. | Uncharacterized conserved protein, LabA/DUF88 family. | 0.448 |
SDM11986.1 | SDM62895.1 | SAMN04488568_10580 | SAMN04488568_11645 | Transcriptional regulator, contains XRE-family HTH domain. | Methyltransferase domain-containing protein. | 0.545 |
SDM13568.1 | SDM62895.1 | SAMN04488568_105131 | SAMN04488568_11645 | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Methyltransferase domain-containing protein. | 0.603 |
SDM27184.1 | SDM02467.1 | SAMN04488568_1085 | SAMN04488568_10438 | Cytochrome P450. | Phytoene synthase. | 0.838 |
SDM27184.1 | SDM62895.1 | SAMN04488568_1085 | SAMN04488568_11645 | Cytochrome P450. | Methyltransferase domain-containing protein. | 0.717 |
SDM42252.1 | SDM62895.1 | SAMN04488568_11120 | SAMN04488568_11645 | DNA polymerase III, chi subunit. | Methyltransferase domain-containing protein. | 0.633 |
SDM62847.1 | SDM62895.1 | SAMN04488568_11643 | SAMN04488568_11645 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.627 |
SDM62847.1 | gloB | SAMN04488568_11643 | SAMN04488568_11644 | Hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.830 |
SDM62847.1 | hisC | SAMN04488568_11643 | SAMN04488568_11646 | Hypothetical protein. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.564 |
SDM62895.1 | SDL76811.1 | SAMN04488568_11645 | SAMN04488568_10282 | Methyltransferase domain-containing protein. | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | 0.593 |
SDM62895.1 | SDL97375.1 | SAMN04488568_11645 | SAMN04488568_103213 | Methyltransferase domain-containing protein. | Uncharacterized conserved protein, LabA/DUF88 family. | 0.586 |
SDM62895.1 | SDM02467.1 | SAMN04488568_11645 | SAMN04488568_10438 | Methyltransferase domain-containing protein. | Phytoene synthase. | 0.638 |
SDM62895.1 | SDM11986.1 | SAMN04488568_11645 | SAMN04488568_10580 | Methyltransferase domain-containing protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.545 |
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