STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM70914.1Tfp pilus assembly protein PilF. (594 aa)    
Predicted Functional Partners:
SDM70888.1
Spore coat polysaccharide biosynthesis protein SpsG, predicted glycosyltransferase.
       0.773
SDM70943.1
Flagellar protein FlbT.
 
     0.698
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.689
SDL79717.1
Flagellar hook-associated protein 3 FlgL.
  
 
   0.680
SDM38950.1
Hypothetical protein.
  
     0.679
SDM70974.1
Flagellar protein FlaF.
 
     0.656
SDM71329.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.647
SDM70790.1
Spore coat polysaccharide biosynthesis protein SpsF.
 
    0.641
SDM88791.1
PAS domain S-box-containing protein.
 
 
 0.635
SDM04431.1
Hypothetical protein.
  
     0.617
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.