Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM79056.1 | SDM79092.1 | SAMN04488568_12223 | SAMN04488568_12224 | Glyoxylase, beta-lactamase superfamily II. | Sulfate permease, SulP family. | 0.882 |
SDM79056.1 | SDM79162.1 | SAMN04488568_12223 | SAMN04488568_12226 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.484 |
SDM79056.1 | acsA | SAMN04488568_12223 | SAMN04488568_12225 | Glyoxylase, beta-lactamase superfamily II. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.486 |
SDM79092.1 | SDM79056.1 | SAMN04488568_12224 | SAMN04488568_12223 | Sulfate permease, SulP family. | Glyoxylase, beta-lactamase superfamily II. | 0.882 |
SDM79092.1 | SDM79162.1 | SAMN04488568_12224 | SAMN04488568_12226 | Sulfate permease, SulP family. | Hypothetical protein. | 0.484 |
SDM79092.1 | acsA | SAMN04488568_12224 | SAMN04488568_12225 | Sulfate permease, SulP family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.484 |
SDM79162.1 | SDM79056.1 | SAMN04488568_12226 | SAMN04488568_12223 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.484 |
SDM79162.1 | SDM79092.1 | SAMN04488568_12226 | SAMN04488568_12224 | Hypothetical protein. | Sulfate permease, SulP family. | 0.484 |
SDM79162.1 | acsA | SAMN04488568_12226 | SAMN04488568_12225 | Hypothetical protein. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.773 |
acsA | SDM79056.1 | SAMN04488568_12225 | SAMN04488568_12223 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Glyoxylase, beta-lactamase superfamily II. | 0.486 |
acsA | SDM79092.1 | SAMN04488568_12225 | SAMN04488568_12224 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Sulfate permease, SulP family. | 0.484 |
acsA | SDM79162.1 | SAMN04488568_12225 | SAMN04488568_12226 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.773 |