STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM80544.1Flp pilus assembly protein TadG. (517 aa)    
Predicted Functional Partners:
SDL84820.1
Pilus assembly protein CpaB.
 
    0.886
SDL84692.1
Pilus assembly protein CpaE.
 
    0.875
SDL84576.1
Tight adherence protein B.
 
  
 0.837
SDL84538.1
Tight adherence protein C.
 
    0.826
SDL84947.1
Flp pilus assembly protein TadG.
 
    0.804
SDL84864.1
Prepilin peptidase CpaA.
 
  
 0.780
SDL84972.1
Flp pilus assembly protein TadG.
 
     0.770
SDL84918.1
Pilus formation protein N terminal region.
  
  
 0.741
SDL84772.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.739
SDL84625.1
Pilus assembly protein CpaF.
 
    0.709
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.