STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM84408.1Threonine dehydratase. (406 aa)    
Predicted Functional Partners:
SDM73343.1
L-threonine synthase.
  
 
 0.951
SDM34515.1
Acetolactate synthase-1/2/3 large subunit.
  
 0.937
SDM82316.1
Acetolactate synthase, large subunit.
  
 0.937
SDM73412.1
Homoserine dehydrogenase.
  
 0.928
SDM52780.1
Threonine synthase.
 
 
 0.910
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 
 0.898
ilvE
Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.881
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
 0.878
SDM14163.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.873
SDL97847.1
Threonine dehydratase.
  
  
 
0.866
Your Current Organism:
Maricaulis salignorans
NCBI taxonomy Id: 144026
Other names: CIP 107439, DSM 16077, LMG 19864, LMG:19864, M. salignorans, Maricaulis salignorans Abraham et al. 2002, Maricaulis sp. MCS18, Marinocaulobacter sp. MCS18, strain MCS 18
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