Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
UA08_02459 | UA08_03819 | A0A225AMT2 | A0A225B6B0 | 60S ribosomal protein L7. | C2H2-type domain-containing protein. | 0.967 |
UA08_02459 | UA08_04233 | A0A225AMT2 | A0A1Q5Q8E2 | 60S ribosomal protein L7. | Uncharacterized protein. | 0.996 |
UA08_02459 | UA08_04489 | A0A225AMT2 | A0A225AYQ3 | 60S ribosomal protein L7. | CP-type G domain-containing protein. | 0.986 |
UA08_02459 | UA08_05728 | A0A225AMT2 | A0A225AXR3 | 60S ribosomal protein L7. | RRM domain-containing protein. | 0.990 |
UA08_02459 | UA08_06589 | A0A225AMT2 | A0A225ALW3 | 60S ribosomal protein L7. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
UA08_02459 | UA08_06975 | A0A225AMT2 | A0A225AQ08 | 60S ribosomal protein L7. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.953 |
UA08_02459 | UA08_07490 | A0A225AMT2 | A0A225AGS2 | 60S ribosomal protein L7. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.990 |
UA08_02459 | UA08_07733 | A0A225AMT2 | A0A225AMC8 | 60S ribosomal protein L7. | Brix domain-containing protein. | 0.979 |
UA08_02459 | UA08_08273 | A0A225AMT2 | A0A225A7B6 | 60S ribosomal protein L7. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.992 |
UA08_02459 | UA08_08597 | A0A225AMT2 | A0A225ADP3 | 60S ribosomal protein L7. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.858 |
UA08_03819 | UA08_02459 | A0A225B6B0 | A0A225AMT2 | C2H2-type domain-containing protein. | 60S ribosomal protein L7. | 0.967 |
UA08_03819 | UA08_04233 | A0A225B6B0 | A0A1Q5Q8E2 | C2H2-type domain-containing protein. | Uncharacterized protein. | 0.993 |
UA08_03819 | UA08_04489 | A0A225B6B0 | A0A225AYQ3 | C2H2-type domain-containing protein. | CP-type G domain-containing protein. | 0.975 |
UA08_03819 | UA08_05728 | A0A225B6B0 | A0A225AXR3 | C2H2-type domain-containing protein. | RRM domain-containing protein. | 0.986 |
UA08_03819 | UA08_06589 | A0A225B6B0 | A0A225ALW3 | C2H2-type domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.991 |
UA08_03819 | UA08_06975 | A0A225B6B0 | A0A225AQ08 | C2H2-type domain-containing protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.969 |
UA08_03819 | UA08_07490 | A0A225B6B0 | A0A225AGS2 | C2H2-type domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.981 |
UA08_03819 | UA08_07733 | A0A225B6B0 | A0A225AMC8 | C2H2-type domain-containing protein. | Brix domain-containing protein. | 0.988 |
UA08_03819 | UA08_08273 | A0A225B6B0 | A0A225A7B6 | C2H2-type domain-containing protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.987 |
UA08_03819 | UA08_08597 | A0A225B6B0 | A0A225ADP3 | C2H2-type domain-containing protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.967 |
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