STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF66051.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
AHF66050.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.995
AHF66052.1
Amine oxidase, flavin-containing.
 
  
 0.965
AHF66054.1
Hypothetical protein.
 
   
 0.946
AHF66053.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
  
 0.941
AHF66049.1
Hypothetical protein.
 
     0.929
AHF66055.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
    0.865
AHF65824.1
Hypothetical protein.
 
  
 0.847
AHF66056.1
Transcriptional regulator, MerR family.
 
   
 0.845
AHF66057.1
Hypothetical protein.
       0.837
AHF70293.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.821
Your Current Organism:
Pseudomonas cichorii
NCBI taxonomy Id: 1441629
Other names: P. cichorii JBC1, Pseudomonas cichorii JBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.