STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103376556Matrix metallopeptidase 19. (473 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
   
 
  0.794
LOC103373294
TIMP metallopeptidase inhibitor 2b.
   
 0.766
LOC103367827
NTR domain-containing protein.
   
 0.766
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.753
TIMP4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.649
cd44
CD44 molecule (Indian blood group) b.
   
 0.579
mmp13
Matrix metallopeptidase 13b.
  
0.563
LOC103370389
ZnMc domain-containing protein.
  
0.560
LOC103370390
ZnMc domain-containing protein.
  
0.560
LOC103357223
Matrix metallopeptidase 20a (enamelysin).
  
0.556
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.