STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab11fip1Uncharacterized protein. (677 aa)    
Predicted Functional Partners:
LOC103362356
RAB11a, member RAS oncogene family, like.
  
 0.934
rab11a
RAB11A, member RAS oncogene family.
  
 0.934
LOC103366835
Uncharacterized protein.
  
 0.923
LOC103369191
Uncharacterized protein.
  
 0.923
LOC103370860
RAB11B, member RAS oncogene family, a.
  
 0.923
LOC103356238
EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.896
LOC103374194
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.896
ENSSPAP00000019501
FIP-RBD domain-containing protein.
    
0.866
rab11fip2
RAB11 family interacting protein 2 (class I).
  
  
 
0.807
LOC103366105
Uncharacterized protein.
     
0.801
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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