STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryba4Crystallin, beta A4; Belongs to the beta/gamma-crystallin family. (183 aa)    
Predicted Functional Partners:
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.634
cryab
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.540
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
      
 0.512
bfsp2
Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family.
   
  
 0.463
LOC103358892
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.456
ENSSPAP00000015532
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.452
LOC103356287
Protein S100; Belongs to the S-100 family.
  
     0.445
LOC103375440
Protein S100; Belongs to the S-100 family.
  
     0.441
ENSSPAP00000018958
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.426
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
      
 0.416
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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