STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mettl22Methyltransferase like 22. (396 aa)    
Predicted Functional Partners:
LOC103375078
Kin17 DNA and RNA binding protein.
    
 0.920
LOC103372864
Kin17 DNA and RNA binding protein.
    
 0.920
b9d1
B9 protein domain 1.
    
 0.783
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.779
ENSSPAP00000004531
Tr-type G domain-containing protein.
    
 0.738
LOC103376165
EFG_C domain-containing protein.
    
 0.738
LOC103363049
Tr-type G domain-containing protein.
    
 0.738
mks1
MKS transition zone complex subunit 1.
    
 0.723
tmem67
Transmembrane protein 67.
     
 0.688
gfm1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
    
 0.642
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.