Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103366867 | adat3 | ENSSPAP00000016328 | ENSSPAP00000000767 | Zgc:136858. | Adenosine deaminase tRNA specific 3. | 0.799 |
LOC103366867 | rbks | ENSSPAP00000016328 | ENSSPAP00000018237 | Zgc:136858. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.859 |
LOC103366867 | smug1 | ENSSPAP00000016328 | ENSSPAP00000000553 | Zgc:136858. | Single-strand-selective monofunctional uracil-DNA glycosylase 1. | 0.817 |
LOC103366867 | uprt | ENSSPAP00000016328 | ENSSPAP00000016771 | Zgc:136858. | Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae). | 0.911 |
adat3 | LOC103366867 | ENSSPAP00000000767 | ENSSPAP00000016328 | Adenosine deaminase tRNA specific 3. | Zgc:136858. | 0.799 |
adat3 | adhfe1 | ENSSPAP00000000767 | ENSSPAP00000026588 | Adenosine deaminase tRNA specific 3. | Alcohol dehydrogenase iron containing 1. | 0.822 |
adat3 | alg5 | ENSSPAP00000000767 | ENSSPAP00000004417 | Adenosine deaminase tRNA specific 3. | ALG5 dolichyl-phosphate beta-glucosyltransferase. | 0.547 |
adat3 | dolk | ENSSPAP00000000767 | ENSSPAP00000006774 | Adenosine deaminase tRNA specific 3. | Dolichol kinase. | 0.769 |
adat3 | pudp | ENSSPAP00000000767 | ENSSPAP00000008704 | Adenosine deaminase tRNA specific 3. | Pseudouridine 5'-phosphatase. | 0.806 |
adat3 | rbks | ENSSPAP00000000767 | ENSSPAP00000018237 | Adenosine deaminase tRNA specific 3. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.681 |
adat3 | smug1 | ENSSPAP00000000767 | ENSSPAP00000000553 | Adenosine deaminase tRNA specific 3. | Single-strand-selective monofunctional uracil-DNA glycosylase 1. | 0.982 |
adat3 | tk1 | ENSSPAP00000000767 | ENSSPAP00000014257 | Adenosine deaminase tRNA specific 3. | Thymidine kinase. | 0.864 |
adat3 | tyms | ENSSPAP00000000767 | ENSSPAP00000014988 | Adenosine deaminase tRNA specific 3. | Thymidylate synthetase. | 0.912 |
adat3 | uprt | ENSSPAP00000000767 | ENSSPAP00000016771 | Adenosine deaminase tRNA specific 3. | Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae). | 0.895 |
adhfe1 | adat3 | ENSSPAP00000026588 | ENSSPAP00000000767 | Alcohol dehydrogenase iron containing 1. | Adenosine deaminase tRNA specific 3. | 0.822 |
adhfe1 | pudp | ENSSPAP00000026588 | ENSSPAP00000008704 | Alcohol dehydrogenase iron containing 1. | Pseudouridine 5'-phosphatase. | 0.846 |
adhfe1 | rbks | ENSSPAP00000026588 | ENSSPAP00000018237 | Alcohol dehydrogenase iron containing 1. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.674 |
adhfe1 | smug1 | ENSSPAP00000026588 | ENSSPAP00000000553 | Alcohol dehydrogenase iron containing 1. | Single-strand-selective monofunctional uracil-DNA glycosylase 1. | 0.822 |
alg5 | adat3 | ENSSPAP00000004417 | ENSSPAP00000000767 | ALG5 dolichyl-phosphate beta-glucosyltransferase. | Adenosine deaminase tRNA specific 3. | 0.547 |
alg5 | dolk | ENSSPAP00000004417 | ENSSPAP00000006774 | ALG5 dolichyl-phosphate beta-glucosyltransferase. | Dolichol kinase. | 0.955 |
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