STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000000752Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
nxf1
Zgc:153681.
    
 0.762
LOC103356278
Protein S100; Belongs to the S-100 family.
    
 0.761
MSL3
MSL complex subunit 3.
    
 0.757
LOC103360372
Mastermind-like transcriptional coactivator 1.
   
 0.678
NCSTN
Nicastrin.
    
 0.666
psenen
Presenilin enhancer, gamma-secretase subunit.
    
 0.645
psen2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.643
psen1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.643
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.634
LOC103353178
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.634
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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