STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo46F-box protein 46. (778 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.797
LOC103361568
Adenylate cyclase activating polypeptide 1b.
    
 0.685
ADCYAP1
Adenylate cyclase activating polypeptide 1a.
    
 0.685
LOC103366129
Parathyroid hormone-like hormone a.
    
 0.684
LOC103366873
Parathyroid hormone-like hormone b.
    
 0.684
crh
Corticotropin releasing hormone b.
    
 0.681
ENSSPAP00000027329
CRF domain-containing protein.
    
 0.681
ucn
Urotensin 1.
    
 0.681
vip
Vasoactive intestinal peptide.
    
 0.679
ghrh
Growth hormone releasing hormone.
    
 0.679
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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