Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000001005Uncharacterized protein. (194 aa)    
Predicted Functional Partners:
ttc7b
Tetratricopeptide repeat domain 7B.
   
 
 0.859
LOC103376063
Tetratricopeptide repeat domain 7A.
   
 
 0.859
pi4ka
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
   
 
 0.843
LOC103373624
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
   
 
 0.843
fam126a
Family with sequence similarity 126 member A.
      
 0.500
COG5
Component of oligomeric golgi complex 5.
   
  
 0.481
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.473
stx5
Syntaxin 5A; Belongs to the syntaxin family.
      
 0.459
eral1
Era-like 12S mitochondrial rRNA chaperone 1.
      
 0.436
cog7
Component of oligomeric golgi complex 7.
      
 0.429
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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