STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103355682Ankyrin repeat and sterile alpha motif domain containing 1Ab. (541 aa)    
Predicted Functional Partners:
ENSSPAP00000017544
ANK_REP_REGION domain-containing protein.
 
      0.783
frem1
Fras1 related extracellular matrix 1a.
   
  0.676
LOC103369110
Fras1 related extracellular matrix 1b.
   
  0.676
LOC103363669
Uncharacterized protein.
   
 0.647
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.647
ENSSPAP00000029812
Guanylate kinase-like domain-containing protein.
   
 0.647
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
birc6
Baculoviral IAP repeat containing 6.
   
 0.613
pla2g4a
Phospholipase A2.
    
 0.595
traf7
TNF receptor-associated factor 7.
    
 0.593
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.