Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103355702Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)    
Predicted Functional Partners:
WDFY4
WDFY family member 4.
     
 0.877
rps27a
Ribosomal protein S27a.
    
  0.844
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.701
nbr1
NBR1 autophagy cargo receptor a.
    
 0.695
gsap
Gamma-secretase activating protein.
    
 0.695
ENSSPAP00000017545
N_BRCA1_IG domain-containing protein.
    
 0.695
sqstm1
Sequestosome 1.
    
 0.695
ENSSPAP00000000794
Ubiquitin-like domain-containing protein.
    
  0.693
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.693
ENSSPAP00000015708
Ubiquitin-like domain-containing protein.
    
  0.693
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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