Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000001210Tetratricopeptide repeat domain 3. (1282 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
   
   0.732
nrde2
NRDE-2, necessary for RNA interference, domain containing.
   
    0.622
LOC103353899
MINDY lysine 48 deubiquitinase 3.
    
 
 0.576
rps27a
Ribosomal protein S27a.
    
 0.571
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.536
ENSSPAP00000000794
Ubiquitin-like domain-containing protein.
    
 0.518
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.518
ENSSPAP00000015708
Ubiquitin-like domain-containing protein.
    
 0.518
ENSSPAP00000015730
Ubiquitin-like domain-containing protein.
    
 0.518
zfand4
Zinc finger, AN1-type domain 4.
   
 0.478
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.