STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103368284Small G protein signaling modulator 3. (755 aa)    
Predicted Functional Partners:
PC
Pyruvate carboxylase b.
     
 0.488
PC-2
Pyruvate carboxylase.
     
 0.488
cep97
Centrosomal protein 97.
 
   
  0.449
otud3
OTU deubiquitinase 3.
      
 0.418
LOC103362262
C2H2-type domain-containing protein.
      
 0.418
nubpl
Nucleotide binding protein-like.
      
 0.414
ufsp2
Ufm1-specific peptidase 2.
      
 0.414
smim7
Small integral membrane protein 7.
    
   0.405
cog4
Component of oligomeric golgi complex 4.
    
   0.405
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.