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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000001263Chimerin 1. (414 aa)    
Predicted Functional Partners:
LOC103373706
Inositol polyphosphate phosphatase-like 1b.
   
 
  0.635
inppl1
Inositol polyphosphate phosphatase-like 1a.
   
 
  0.635
rac3
Rac family small GTPase 3b.
    
 0.608
rac2
Uncharacterized protein.
    
 0.608
rhov
Ras homolog family member V.
    
 0.608
RAC1
Rac family small GTPase 1.
    
 0.608
ENSSPAP00000013389
Ras homolog gene family, member Gd.
    
 0.608
LOC103354640
Ras homolog family member Gb.
    
 0.608
rhou
Uncharacterized protein.
    
 0.608
LOC103356837
Uncharacterized protein.
    
 0.608
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.