Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366592Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
LOC103359921
Cytochrome c oxidase subunit 7C.
   
 0.999
LOC103371189
Cytochrome c oxidase subunit 6C.
   
 0.999
ENSSPAP00000001906
Cytochrome c oxidase subunit 4I2.
   
 0.998
LOC103374647
Cytochrome c oxidase subunit 4I1.
   
 0.998
LOC103375935
Uncharacterized protein.
   
 0.998
LOC103353613
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.998
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.998
LOC103360649
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.997
LOC103359137
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.997
LOC103371655
Cytochrome c oxidase subunit 7B.
   
 0.996
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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