STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103376578Low density lipoprotein receptor-related protein 1Aa. (4451 aa)    
Predicted Functional Partners:
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.970
gulp1
GULP PTB domain containing engulfment adaptor 1a.
    
 0.918
calr3
Calreticulin.
    
 0.906
LOC103353071
Calreticulin 3b.
    
 0.906
LOC103370401
Calreticulin.
    
 0.906
apoe
Apolipoprotein Eb.
    
 0.900
LOC103371870
PID domain-containing protein.
    
  0.883
LOC103362052
Low density lipoprotein receptor-related protein 1Ab.
     
  0.876
C1QA
Complement C1q A chain.
    
  0.870
dkk1
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.862
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.