STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rims4Regulating synaptic membrane exocytosis 4. (268 aa)    
Predicted Functional Partners:
ENSSPAP00000017360
PDZ domain-containing protein.
 
 
 0.944
ENSSPAP00000024489
Regulating synaptic membrane exocytosis 1a.
 
 
    0.897
LOC103363669
Uncharacterized protein.
   
 0.662
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.662
ENSSPAP00000029812
Guanylate kinase-like domain-containing protein.
   
 0.662
LOC103369709
RAB3A, member RAS oncogene family.
    
 0.633
LOC103373893
RAB3C, member RAS oncogene family.
    
 0.633
LOC103369105
RAB3B, member RAS oncogene family.
    
 0.633
rab3d
RAB3D, member RAS oncogene family, b.
    
 0.633
LOC103360788
RAB3A, member RAS oncogene family, b.
    
 0.633
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.