Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375085Si:dkey-241l7.2. (173 aa)    
Predicted Functional Partners:
tnn
Tenascin N.
    
  0.635
ENSSPAP00000007814
Uncharacterized protein.
    
  0.635
tnr
Tenascin R (restrictin, janusin).
    
  0.635
LOC103374965
Zmp:0000000846.
    
  0.635
LOC103356464
Tenascin C.
    
  0.635
tyrobp
Uncharacterized protein.
    
 0.542
LOC103375488
Ig-like domain-containing protein; Belongs to the MHC class I family.
    
  0.530
LOC103361572
Collectin sub-family member 12.
    
  0.517
LOC103368824
Uncharacterized protein.
    
  0.508
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.496
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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