STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103364352Myxovirus (influenza) resistance B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (642 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.959
usp18
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 0.938
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.899
ENSSPAP00000020082
Uncharacterized protein.
 
  
  0.841
LOC103371221
Intersectin 2b.
    
 
 0.831
ENSSPAP00000031427
Uncharacterized protein.
    
 
 0.831
ENSSPAP00000031428
Uncharacterized protein.
    
 
 0.831
ENSSPAP00000022077
GED domain-containing protein.
 
  
  0.826
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.812
prkn
RBR-type E3 ubiquitin transferase.
    
 0.796
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.