Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
esrp2Epithelial splicing regulatory protein 2. (717 aa)    
Predicted Functional Partners:
LOC103368877
RNA binding protein, mRNA processing factor 2b.
    
 0.868
LOC103363883
RNA binding protein, mRNA processing factor.
    
 
 0.843
ENSSPAP00000006210
Uncharacterized protein.
    
 
 0.843
LOC103376616
QKI, KH domain containing, RNA binding 2.
    
 0.613
LOC103376478
QKI, KH domain containing, RNA binding a.
    
 0.613
ranbp2
RAN binding protein 2.
    
   0.609
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
     
 0.594
mrpl13
Mitochondrial ribosomal protein L13.
    
 
 0.590
mrpl4
Mitochondrial ribosomal protein L4.
    
 
 0.589
MRPL49
Mitochondrial ribosomal protein L49.
    
   0.584
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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