STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000001434T-box transcription factor 6. (574 aa)    
Predicted Functional Partners:
msgn1
Mesogenin 1.
   
 0.775
gata4
GATA binding protein 4.
   
 0.693
ENSSPAP00000024074
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.631
gata5
GATA binding protein 5.
   
 0.588
gata6
GATA binding protein 6.
   
 0.588
ENSSPAP00000018005
Membrane frizzled-related protein.
    
 0.587
GATA2
GATA binding protein 2.
   
 0.586
LOC103365900
GATA binding protein 1a.
   
 0.564
LOC103366788
Neuropilin; Belongs to the neuropilin family.
    
 0.563
LOC103372445
Procollagen C-endopeptidase enhancer b.
    
 0.563
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.