STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rasa1RAS p21 protein activator (GTPase activating protein) 1a. (1045 aa)    
Predicted Functional Partners:
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.973
LOC103357265
HRas proto-oncogene, GTPase a.
   
 0.967
LOC103374945
Zgc:55558.
   
 0.967
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.967
LOC103360940
Docking protein 1b.
    
 
 0.949
LOC103373551
RAS related.
    
 0.943
mras
Muscle RAS oncogene homolog.
    
 0.943
rras2
RAS related 2.
    
 0.943
LOC103363264
Rho GTPase activating protein 35b.
    
 0.929
arhgap5
Rho GTPase activating protein 5.
    
 0.929
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.