STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ralgapa1Ral GTPase activating protein, alpha subunit 1 (catalytic). (2019 aa)    
Predicted Functional Partners:
ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
   
0.854
ENSSPAP00000027029
Ras homolog family member H.
    
  0.673
LOC103370959
Ras homolog family member Q.
    
  0.673
fam91a1
Family with sequence similarity 91 member A1.
     
 0.670
ENSSPAP00000013389
Ras homolog gene family, member Gd.
    
 0.579
LOC103354640
Ras homolog family member Gb.
    
 0.579
afdn
Afadin, adherens junction formation factor a.
    
 0.574
rala
V-ral simian leukemia viral oncogene homolog Aa (ras related).
    
 0.570
LOC103368786
Uncharacterized protein.
    
 0.570
LOC103370956
V-ral simian leukemia viral oncogene homolog Ba (ras related).
    
 0.570
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.