Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ptpn9Protein tyrosine phosphatase non-receptor type 9a. (576 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.783
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
 0.783
LOC103360420
Macrophage stimulating 1 receptor a.
    
 0.783
mst1r
Macrophage stimulating 1 receptor b.
    
 0.783
gdap2
Ganglioside induced differentiation associated protein 2.
      
 0.699
znf414
C2H2-type domain-containing protein.
      
 0.616
tnn
Tenascin N.
   
  0.600
ENSSPAP00000007814
Uncharacterized protein.
   
  0.600
tnr
Tenascin R (restrictin, janusin).
   
  0.600
LOC103374965
Zmp:0000000846.
   
  0.600
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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