STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103372209Ras and Rab interactor 2. (1110 aa)    
Predicted Functional Partners:
rabgef1
Uncharacterized protein.
    
0.723
LOC103366651
Uncharacterized protein.
    
 0.723
LOC103357827
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
0.723
rab5c
RAB5C, member RAS oncogene family.
    
 0.694
rab5a
RAB5A, member RAS oncogene family, b.
    
 0.694
LOC103369712
Uncharacterized protein.
    
 0.694
LOC103376428
RAB5A, member RAS oncogene family, a.
    
 0.694
LOC103367528
RAB5B, member RAS oncogene family.
    
 0.694
LOC103370946
Uncharacterized protein.
    
 0.694
abl2
Tyrosine-protein kinase.
    
 0.682
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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