STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358229KN motif and ankyrin repeat domains 2. (1039 aa)    
Predicted Functional Partners:
kif21a
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.860
KIF21A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.860
ENSSPAP00000028973
WD_REPEATS_REGION domain-containing protein.
    
 
 0.860
spc24
SPC24 component of NDC80 kinetochore complex.
    
 0.692
birc6
Baculoviral IAP repeat containing 6.
   
 0.642
grb2
Growth factor receptor-bound protein 2b.
    
 0.635
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 0.602
ino80e
INO80 complex subunit E.
    
 0.600
pla2g4a
Phospholipase A2.
    
 0.595
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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