STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncaph2Non-SMC condensin II complex, subunit H2. (586 aa)    
Predicted Functional Partners:
ncapd3
Non-SMC condensin II complex, subunit D3.
   
 0.999
smc2
Structural maintenance of chromosomes protein.
   
 0.999
ncapg2
Non-SMC condensin II complex, subunit G2.
   
 0.999
smc4
Structural maintenance of chromosomes protein.
   
 0.994
smc3
Structural maintenance of chromosomes protein.
   
 0.893
LOC103366935
Structural maintenance of chromosomes protein.
   
 0.883
smc1a
Structural maintenance of chromosomes protein.
   
 0.883
smc5
Structural maintenance of chromosomes 5.
   
 0.879
RBM20
RNA binding motif protein 20.
   
 0.876
smc6
Si:dkey-119f1.1.
   
 0.874
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.