STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aars1Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (966 aa)    
Predicted Functional Partners:
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.973
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
   
 0.972
anapc5
Anaphase promoting complex subunit 5.
   
 0.971
anapc1
Anaphase promoting complex subunit 1.
   
 0.971
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
 0.970
anapc7
Anaphase promoting complex subunit 7.
   
 0.956
LOC103367014
Prostaglandin E synthase 3 like.
   
 
 0.948
anapc13
Anaphase promoting complex subunit 13.
    
 0.943
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.942
cdc26
Cell division cycle 26 homolog.
    
 0.927
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.