Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
commd9COMM domain containing 9. (206 aa)    
Predicted Functional Partners:
ccdc22
Coiled-coil domain containing 22.
   
 0.997
commd6
COMM domain containing 6.
    
 0.997
commd2
COMM domain containing 2.
   
 0.997
commd4
COMM domain containing 4.
   
 0.997
LOC103375273
COMM domain containing 5.
   
 0.996
COMMD10
COMM domain containing 10.
   
 0.996
commd1
Copper metabolism (Murr1) domain containing 1.
   
 0.996
commd8
COMM domain containing 8.
   
 0.996
ccdc93
Coiled-coil domain containing 93.
    
 
 0.992
ENSSPAP00000019433
COMM domain containing 7.
   
 0.991
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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