STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103357693Ankyrin 1, erythrocytic b. (1371 aa)    
Predicted Functional Partners:
ENSSPAP00000020704
Death domain-containing protein.
 
      0.899
RNF146
Ring finger protein 146.
    
 0.657
LOC103372716
Ring finger protein 146.
    
 0.657
axin1
Axin 1.
    
 0.633
LOC103366227
Uncharacterized protein.
    
 0.633
LOC103361462
Axin 2 (conductin, axil).
    
 0.633
AXIN2
Axin 2.
    
 0.633
birc6
Baculoviral IAP repeat containing 6.
   
 0.623
gak
Cyclin G associated kinase.
  
 0.621
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.