STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103355783Immunoglobulin like and fibronectin type III domain containing 1, tandem duplicate 2. (1257 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.686
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.667
tex10
Testis expressed 10.
   
 0.652
LOC103363874
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.650
rhbdl3
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
    
  0.629
LOC103374050
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.625
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.625
LOC103372325
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.620
calm1
Calmodulin 1.
    
 0.620
LOC103353515
Calmodulin.
    
 0.620
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.